- Predicted Gene MLOC_74893
MLOC_74893 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.5743 | 42.8229 | 36.514 | 30.8896 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 38.9911 | 38.5803 | 32.0598 | 29.3291 |
| INF1 | Young developing inflorescences (5mm) | 49.3394 | 48.3248 | 41.9801 | 36.6926 |
| INF2 | Developing inflorescences (1-1.5 cm) | 44.2481 | 47.0927 | 40.7553 | 45.5358 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 22.9703 | 38.6993 | 27.6496 | 38.9001 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 21.2813 | 23.2613 | 17.8236 | 71.4499 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 49.458 | 45.147 | 50.4015 | 42.8023 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 17.3976 | 17.8919 | 17.3535 | 36.9979 |
CDS Structure of MLOC_74893
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_74893.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g01170.1 |
+3 |
0.0 |
863 |
512/627 (82%) |
13102.m00028 protein HECT-domain domain containing protein, expressed |
| TAIR PP10 |
AT4G38600.1 |
+3 |
0.0 |
1605 |
970/1561 (62%) |
| Symbols: KAK, UPL3 | HEAT repeat ;HECT-domain (ubiquitin-transferase) | chr4:18041503-18049292 REVERSE LENGTH=1888 |