MLOC_74892 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.548311.142811.00579.28703
LEAShoots from the seedlings (10 cm shoot stage)14.392519.753619.125612.3167
INF1Young developing inflorescences (5mm)10.618314.074315.18488.87522
INF2Developing inflorescences (1-1.5 cm)11.397915.342711.251512.1578
ROORoots from the seedlings (10 cm shoot stage)8.2652213.869311.295212.2487
NODDeveloping tillers at six leaf stage, 3rd internode11.60313.56212.022834.3849
CAR5Developing grain, bracts removed (5 DPA)12.709613.804715.212311.3482
CAR15Developing grain, bracts removed (15 DPA)1.86641.812162.742463.72173



CDS Structure of MLOC_74892






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74892.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74892.1CUST_13207_PI427708083AvailableAvailablecontig_66724 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g19350.1 -2 2e-22 93 45/50 (90%) 13112.m02056 protein expressed protein
TAIR PP10 AT5G40550.2 -2 4e-15 71 32/46 (70%) SGF29 tudor-like domain | chr5:16241285-16243100 FORWARD LENGTH=270