MLOC_74891 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1057980.599620.365750.388253
LEAShoots from the seedlings (10 cm shoot stage)0.7952460.7611150.6895040.605305
INF1Young developing inflorescences (5mm)0.8157320.4671030.4947210.469263
INF2Developing inflorescences (1-1.5 cm)1.476521.268341.542691.39345
ROORoots from the seedlings (10 cm shoot stage)0.1133690.3650620.3232410.323409
NODDeveloping tillers at six leaf stage, 3rd internode0.1252210.2621420.1206530.677316
CAR5Developing grain, bracts removed (5 DPA)0.9962290.8381980.9921060.789673
CAR15Developing grain, bracts removed (15 DPA)0.3099820.2017690.2244620.523973



CDS Structure of MLOC_74891






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74891.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74891.1NoneAvailableAvailablecontig_66724 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g37620.1 +2 1e-65 178 108/247 (44%) 13110.m03415 protein retrotransposon protein, putative, unclassified
TAIR PP10 AT5G40550.2 -3 2e-13 73 33/48 (69%) SGF29 tudor-like domain | chr5:16241285-16243100 FORWARD LENGTH=270