- Predicted Gene MLOC_74891
MLOC_74891 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_74891_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_74891_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.105798 | 0.59962 | 0.36575 | 0.388253 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.795246 | 0.761115 | 0.689504 | 0.605305 |
INF1 | Young developing inflorescences (5mm) | 0.815732 | 0.467103 | 0.494721 | 0.469263 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.47652 | 1.26834 | 1.54269 | 1.39345 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.113369 | 0.365062 | 0.323241 | 0.323409 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.125221 | 0.262142 | 0.120653 | 0.677316 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.996229 | 0.838198 | 0.992106 | 0.789673 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.309982 | 0.201769 | 0.224462 | 0.523973 |
CDS Structure of MLOC_74891
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_74891.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g37620.1 |
+2 |
1e-65 |
178 |
108/247 (44%) |
13110.m03415 protein retrotransposon protein, putative, unclassified |
TAIR PP10 |
AT5G40550.2 |
-3 |
2e-13 |
73 |
33/48 (69%) |
SGF29 tudor-like domain | chr5:16241285-16243100 FORWARD LENGTH=270 |