MLOC_74853 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.772629.028623.293824.2401
LEAShoots from the seedlings (10 cm shoot stage)23.015821.462320.299817.9474
INF1Young developing inflorescences (5mm)49.250453.779447.84143.7615
INF2Developing inflorescences (1-1.5 cm)38.585837.611532.360841.7621
ROORoots from the seedlings (10 cm shoot stage)8.4219217.424911.808818.1189
NODDeveloping tillers at six leaf stage, 3rd internode2.696844.887844.3378914.5415
CAR5Developing grain, bracts removed (5 DPA)35.650131.012430.765132.6842
CAR15Developing grain, bracts removed (15 DPA)4.088183.344543.765889.12893



CDS Structure of MLOC_74853






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74853.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74853.2CUST_13206_PI427708083AvailableAvailablecontig_66655 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g32986.1 -2 4e-148 457 269/329 (82%) 13112.m03364 protein heat shock protein, putative, expressed
TAIR PP10 AT3G07770.1 -2 5e-112 361 177/221 (80%) | Symbols: Hsp89.1, AtHsp90.6, AtHsp90-6 | HEAT SHOCK PROTEIN 89.1 | chr3:2479611-2483970 FORWARD LENGTH=799