MLOC_74834 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.23454200.09127390.12175
LEAShoots from the seedlings (10 cm shoot stage)1.654140.1284441.956531.01988
INF1Young developing inflorescences (5mm)0.080974800.03331760.0436707
INF2Developing inflorescences (1-1.5 cm)000.03413710.0287841
ROORoots from the seedlings (10 cm shoot stage)89.847541.913478.546756.3832
NODDeveloping tillers at six leaf stage, 3rd internode0.0222635000.00976749
CAR5Developing grain, bracts removed (5 DPA)0.03529340.06706870.06756270.0744624
CAR15Developing grain, bracts removed (15 DPA)0000.0341988



CDS Structure of MLOC_74834






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74834.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74834.1CUST_16098_PI427708080AvailableAvailablecontig_66622 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g01270.1 -1 1e-143 419 197/245 (80%) 13103.m00042 protein expansin precursor, putative, expressed
TAIR PP10 AT1G65680.1 -1 4e-71 229 118/239 (49%) | Symbols: ATEXPB2, EXPB2, ATHEXP BETA 1.4 | expansin B2 | chr1:24427266-24428399 FORWARD LENGTH=273