MLOC_74807 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.047262.699882.635612.83481
LEAShoots from the seedlings (10 cm shoot stage)3.293765.778894.677934.39738
INF1Young developing inflorescences (5mm)4.817375.80626.006845.08488
INF2Developing inflorescences (1-1.5 cm)7.200968.23156.873499.02477
ROORoots from the seedlings (10 cm shoot stage)2.06234.065333.04485.28901
NODDeveloping tillers at six leaf stage, 3rd internode2.095722.787114.1596511.507
CAR5Developing grain, bracts removed (5 DPA)8.929777.940468.087738.90741
CAR15Developing grain, bracts removed (15 DPA)5.299254.714625.3488212.8515



CDS Structure of MLOC_74807






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74807.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74807.4CUST_16095_PI427708080AvailableAvailablecontig_66557 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g41380.1 +1 2e-156 482 312/703 (44%) 13112.m04317 protein ulp1 protease family protein, putative, expressed
TAIR PP10 AT1G10570.2 +1 2e-76 263 128/266 (48%) | Symbols: OTS2, ULP1C | Cysteine proteinases superfamily protein | chr1:3487639-3491102 FORWARD LENGTH=570