MLOC_74794 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.034784.320324.772335.13693
LEAShoots from the seedlings (10 cm shoot stage)6.673276.992788.37527.17918
INF1Young developing inflorescences (5mm)6.686447.751997.574246.89775
INF2Developing inflorescences (1-1.5 cm)11.718210.653211.098213.2254
ROORoots from the seedlings (10 cm shoot stage)7.458817.640366.3126510.5934
NODDeveloping tillers at six leaf stage, 3rd internode5.273738.081767.487230.2451
CAR5Developing grain, bracts removed (5 DPA)8.30218.646268.704389.23235
CAR15Developing grain, bracts removed (15 DPA)4.966054.462814.9699812.0828



CDS Structure of MLOC_74794






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74794.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74794.1CUST_16093_PI427708080AvailableAvailablecontig_66536 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g42370.1 -3 0.0 753 402/507 (79%) 13112.m04449 protein GTPase of unknown function domain containing protein, putative, expressed
TAIR PP10 AT1G08410.1 -3 0.0 575 313/520 (60%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:2646307-2649106 FORWARD LENGTH=589