- Predicted Gene MLOC_74792
MLOC_74792 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 116.22 | 71.3903 | 80.1583 | 92.6847 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 32.6741 | 42.6947 | 40.5489 | 34.4443 |
| INF1 | Young developing inflorescences (5mm) | 27.8949 | 32.0273 | 36.9695 | 31.1178 |
| INF2 | Developing inflorescences (1-1.5 cm) | 20.9667 | 21.9364 | 24.4625 | 27.9554 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 75.0666 | 55.9278 | 65.168 | 79.0201 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 59.0642 | 44.9869 | 46.5392 | 135.898 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 58.1233 | 74.8444 | 55.8836 | 74.1123 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 75.4536 | 66.821 | 55.6548 | 187.953 |
CDS Structure of MLOC_74792
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_74792.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g73140.1 |
+1 |
9e-52 |
168 |
90/111 (81%) |
13101.m07983 protein ubiquitin-fold modifier 1 precursor, putative, expressed |
| TAIR PP10 |
AT1G77710.1 |
+1 |
7e-49 |
159 |
79/82 (96%) |
CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244 Blast hits to 244 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). | chr1:29206750-29207895 FORWARD LENGTH=93 |