MLOC_74748 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains26.339439.669440.489134.336
LEAShoots from the seedlings (10 cm shoot stage)38.624525.585627.029425.4311
INF1Young developing inflorescences (5mm)33.671730.713330.551224.9596
INF2Developing inflorescences (1-1.5 cm)27.826933.323129.966131.2155
ROORoots from the seedlings (10 cm shoot stage)36.403645.852735.928849.2588
NODDeveloping tillers at six leaf stage, 3rd internode33.834931.57123.352693.4653
CAR5Developing grain, bracts removed (5 DPA)41.371938.136239.051735.3282
CAR15Developing grain, bracts removed (15 DPA)18.951216.745416.783837.3596



CDS Structure of MLOC_74748






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74748.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361973NoneNoneNoneNone
MLOC_74748.1CUST_6420_PI427708080AvailableAvailablecontig_66471 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g38110.1 +2 0.0 1519 816/872 (94%) 13112.m03924 protein importin subunit beta, putative, expressed
TAIR PP10 AT5G53480.1 +2 0.0 1298 687/871 (79%) ARM repeat superfamily protein | chr5:21714016-21716709 FORWARD LENGTH=870