MLOC_74720 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.460091.499431.90621.74795
LEAShoots from the seedlings (10 cm shoot stage)2.260133.504081.522761.8908
INF1Young developing inflorescences (5mm)0.446050.3262970.5057930.372198
INF2Developing inflorescences (1-1.5 cm)0.6784580.9580760.9002810.956166
ROORoots from the seedlings (10 cm shoot stage)2.066521.061511.517651.24766
NODDeveloping tillers at six leaf stage, 3rd internode1.729942.481142.208356.60264
CAR5Developing grain, bracts removed (5 DPA)2.699152.517641.657382.35286
CAR15Developing grain, bracts removed (15 DPA)3.726443.487133.141118.96273



CDS Structure of MLOC_74720






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74720.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371041NoneNoneNoneNone
MLOC_74720.1CUST_6417_PI427708080AvailableAvailablecontig_66420 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g47210.1 +2 0.0 736 392/446 (88%) 13102.m05311 protein amino acid permease family protein, putative, expressed
TAIR PP10 AT1G31830.2 +2 0.0 610 313/446 (70%) Amino acid permease family protein | chr1:11418875-11420314 REVERSE LENGTH=479