MLOC_74717 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains72.136111.808111.6996.9173
LEAShoots from the seedlings (10 cm shoot stage)159.845213.504211.519163.471
INF1Young developing inflorescences (5mm)69.955768.515568.548255.3518
INF2Developing inflorescences (1-1.5 cm)99.543176.441589.141491.1251
ROORoots from the seedlings (10 cm shoot stage)149.651168.549149.832196.161
NODDeveloping tillers at six leaf stage, 3rd internode74.7199113.185123.628400.953
CAR5Developing grain, bracts removed (5 DPA)218.112200.271214.293192.937
CAR15Developing grain, bracts removed (15 DPA)122.15113.368114.055249.204



CDS Structure of MLOC_74717






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74717.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250857.1NoneNoneNoneNone
MLOC_74717.1CUST_6416_PI427708080AvailableAvailablecontig_66412 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g38050.3 +1 0.0 949 565/900 (63%) 13102.m04175 protein joka2, putative, expressed
TAIR PP10 AT4G24690.1 +1 4e-99 332 207/480 (43%) ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein | chr4:12741191-12744202 FORWARD LENGTH=704