MLOC_74676 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains63.128444.247850.168753.3838
LEAShoots from the seedlings (10 cm shoot stage)00.10735300.174921
INF1Young developing inflorescences (5mm)00.026525800.0312628
INF2Developing inflorescences (1-1.5 cm)0.023844000.0298132
ROORoots from the seedlings (10 cm shoot stage)10.156410.30355.7154711.857
NODDeveloping tillers at six leaf stage, 3rd internode0.1559950.5261370.02500161.20541
CAR5Developing grain, bracts removed (5 DPA)0.02912820.05551480.05691810.0530771
CAR15Developing grain, bracts removed (15 DPA)00.0496170.03071690.17258



CDS Structure of MLOC_74676






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74676.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74676.1CUST_16082_PI427708080AvailableAvailablecontig_66327 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g39990.1 -1 0.0 604 313/396 (79%) 13111.m03952 protein patatin, putative, expressed
TAIR PP10 AT4G37050.1 -1 9e-137 406 211/403 (52%) | Symbols: PLP4, PLA V, AtPLAIVC | PATATIN-like protein 4 | chr4:17457261-17459642 REVERSE LENGTH=428