MLOC_74648 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.745414.701923.927243.86655
LEAShoots from the seedlings (10 cm shoot stage)5.541015.998419.246475.92403
INF1Young developing inflorescences (5mm)1.75311.769031.89631.46434
INF2Developing inflorescences (1-1.5 cm)1.208561.652781.673241.60587
ROORoots from the seedlings (10 cm shoot stage)53.312951.633526.400960.543
NODDeveloping tillers at six leaf stage, 3rd internode0.1396830.1755710.2955910.664261
CAR5Developing grain, bracts removed (5 DPA)29.033231.307435.64330.3001
CAR15Developing grain, bracts removed (15 DPA)2.257171.862741.696544.42551



CDS Structure of MLOC_74648






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74648.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK253079.1NoneNoneNoneNone
MLOC_74648.1CUST_6406_PI427708080AvailableAvailablecontig_6626 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g30740.1 -1 0.0 1692 874/968 (90%) 13108.m03182 protein ABC transporter, ATP-binding protein, putative, expressed
TAIR PP10 AT3G47730.1 -1 0.0 1246 631/974 (65%) | Symbols: ATATH1, ATH1, ABCA2 | ATP-binding cassette A2 | chr3:17594342-17598828 REVERSE LENGTH=983