MLOC_74642 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.759470.8051221.138520.805904
LEAShoots from the seedlings (10 cm shoot stage)0.3613380.5484610.06133110.239028
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.025853600.0365997
ROORoots from the seedlings (10 cm shoot stage)12.127616.20435.4234713.7863
NODDeveloping tillers at six leaf stage, 3rd internode0.09105810.07489350.09833390.185648
CAR5Developing grain, bracts removed (5 DPA)00.032498400.0334767
CAR15Developing grain, bracts removed (15 DPA)000.03629430.0551507



CDS Structure of MLOC_74642






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74642.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373092NoneNoneNoneNone
MLOC_74642.1CUST_6403_PI427708080AvailableAvailablecontig_66248 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g48560.1 +2 0.0 626 300/395 (76%) 13102.m05493 protein fatty acid desaturase, putative, expressed
TAIR PP10 AT3G12120.2 +2 3e-173 500 235/386 (61%) | Symbols: FAD2 | fatty acid desaturase 2 | chr3:3860592-3861743 REVERSE LENGTH=383