MLOC_74633 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4683220.2630870.3781250.353028
LEAShoots from the seedlings (10 cm shoot stage)20.227442.581738.011827.9598
INF1Young developing inflorescences (5mm)0.01701830.0595570.1060950.0639917
INF2Developing inflorescences (1-1.5 cm)0.0369960.05296090.111730.0767971
ROORoots from the seedlings (10 cm shoot stage)3.169534.209254.984964.74834
NODDeveloping tillers at six leaf stage, 3rd internode170.535227.355173.255609.016
CAR5Developing grain, bracts removed (5 DPA)0.2287630.1310670.1952390.185735
CAR15Developing grain, bracts removed (15 DPA)0.4663660.509990.3818531.21018



CDS Structure of MLOC_74633






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74633.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366186NoneNoneNoneNone
MLOC_74633.2CUST_6401_PI427708080AvailableAvailablecontig_66231 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g39370.1 -2 0.0 851 436/550 (79%) 13108.m04199 protein citrate transporter, putative, expressed
TAIR PP10 AT5G47560.1 -2 0.0 662 321/488 (66%) | Symbols: ATTDT, ATSDAT, TDT | tonoplast dicarboxylate transporter | chr5:19287895-19290347 REVERSE LENGTH=540