MLOC_74624 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains34.028542.36134.047833.7279
LEAShoots from the seedlings (10 cm shoot stage)27.288218.638518.069817.11
INF1Young developing inflorescences (5mm)139.493149.245142.962102.759
INF2Developing inflorescences (1-1.5 cm)103.695107.81395.711999.4984
ROORoots from the seedlings (10 cm shoot stage)14.347434.914525.971732.1025
NODDeveloping tillers at six leaf stage, 3rd internode3.016425.4914216.512722.22
CAR5Developing grain, bracts removed (5 DPA)36.130136.571241.405431.5898
CAR15Developing grain, bracts removed (15 DPA)15.921413.584112.929327.5257



CDS Structure of MLOC_74624






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74624.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370361NoneNoneNoneNone
MLOC_74624.1CUST_6398_PI427708080AvailableAvailablecontig_66215 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g46310.1 +2 0.0 922 503/681 (74%) 13104.m04656 protein HEAT repeat family protein, putative, expressed
TAIR PP10 AT3G06530.3 +2 7e-161 515 287/620 (46%) ARM repeat superfamily protein | chr3:2022596-2033637 FORWARD LENGTH=2188