MLOC_74618 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.336413.04927.994429.42376
LEAShoots from the seedlings (10 cm shoot stage)9.4409113.765912.56929.15895
INF1Young developing inflorescences (5mm)0.6996380.6675580.5279990.560563
INF2Developing inflorescences (1-1.5 cm)0.518290.2827020.4085590.447212
ROORoots from the seedlings (10 cm shoot stage)3.4296.531217.579956.59219
NODDeveloping tillers at six leaf stage, 3rd internode3.08811.539711.951333.85028
CAR5Developing grain, bracts removed (5 DPA)1.193881.50451.487531.39412
CAR15Developing grain, bracts removed (15 DPA)0.5207780.374030.4731191.15163



CDS Structure of MLOC_74618






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74618.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74618.1CUST_13202_PI427708083AvailableAvailablecontig_66206 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g33320.1 -2 2e-42 157 127/177 (72%) 13105.m03443 protein expressed protein
TAIR PP10 AT4G02940.1 -2 6e-22 101 45/71 (63%) oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr4:1306658-1310699 FORWARD LENGTH=569