MLOC_74605 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains63.816846.52153.263256.7173
LEAShoots from the seedlings (10 cm shoot stage)0.5947040.37794400.422464
INF1Young developing inflorescences (5mm)0.2193480.2219330.1741020.198756
INF2Developing inflorescences (1-1.5 cm)0.05790110.084020800.111263
ROORoots from the seedlings (10 cm shoot stage)49.939120.31432.037530.1928
NODDeveloping tillers at six leaf stage, 3rd internode0.2817070.01284990.009980810.0320596
CAR5Developing grain, bracts removed (5 DPA)0.07146820.03368330.0697910.0752616
CAR15Developing grain, bracts removed (15 DPA)0.1806880.1179640.2997990.494657



CDS Structure of MLOC_74605






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74605.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250811.1NoneNoneNoneNone
MLOC_74605.1CUST_6396_PI427708080AvailableAvailablecontig_66186 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g48010.1 +1 2e-140 409 212/292 (73%) 13107.m05129 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G05340.1 +1 5e-116 346 178/291 (61%) Peroxidase superfamily protein | chr5:1579142-1580819 REVERSE LENGTH=324