MLOC_74587 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains226.617167.236182.574204.877
LEAShoots from the seedlings (10 cm shoot stage)138.9227.425853.939364.2752
INF1Young developing inflorescences (5mm)172.776185.32160.643166.11
INF2Developing inflorescences (1-1.5 cm)133.993172.974155.725189.443
ROORoots from the seedlings (10 cm shoot stage)298.602245.213177.758315.221
NODDeveloping tillers at six leaf stage, 3rd internode820.2881254.69814.5063926.47
CAR5Developing grain, bracts removed (5 DPA)152.568169.529172.239180.379
CAR15Developing grain, bracts removed (15 DPA)14.685213.458415.785137.8584



CDS Structure of MLOC_74587






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74587.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74587.1CUST_16070_PI427708080AvailableAvailablecontig_66163 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g18050.1 -3 0.0 848 427/430 (99%) 13101.m01962 protein tubulin/FtsZ domain containing protein, putative, expressed
TAIR PP10 AT5G12250.1 -3 0.0 842 423/430 (98%) | Symbols: TUB6 | beta-6 tubulin | chr5:3961317-3962971 REVERSE LENGTH=449