- Predicted Gene MLOC_74552
MLOC_74552 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 57.7352 | 77.9264 | 78.7523 | 83.8845 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 55.5246 | 44.2711 | 41.2995 | 44.8214 |
| INF1 | Young developing inflorescences (5mm) | 39.7533 | 35.7171 | 36.2542 | 34.7446 |
| INF2 | Developing inflorescences (1-1.5 cm) | 29.8161 | 37.1413 | 34.2737 | 41.0433 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 43.6525 | 67.6792 | 57.8631 | 90.9918 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 77.7871 | 45.61 | 38.9401 | 176.496 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 90.7669 | 86.9263 | 89.2826 | 95.5749 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 55.2033 | 55.7273 | 51.3343 | 137.673 |
CDS Structure of MLOC_74552
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_74552.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g41890.1 |
-2 |
0.0 |
707 |
426/468 (91%) |
13111.m04161 protein RNA recognition motif containing protein, putative, expressed |
| TAIR PP10 |
AT3G07810.1 |
-2 |
5e-149 |
444 |
261/480 (54%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:2492875-2495052 FORWARD LENGTH=494 |
