MLOC_74540 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.683835.254064.561685.09092
LEAShoots from the seedlings (10 cm shoot stage)3.055236.018124.820663.93743
INF1Young developing inflorescences (5mm)6.904058.901059.535396.5855
INF2Developing inflorescences (1-1.5 cm)7.135797.076197.926417.46731
ROORoots from the seedlings (10 cm shoot stage)0.8090431.650442.363081.90703
NODDeveloping tillers at six leaf stage, 3rd internode3.794825.824585.4416320.4226
CAR5Developing grain, bracts removed (5 DPA)5.716666.902288.424756.37294
CAR15Developing grain, bracts removed (15 DPA)5.708185.824665.6531611.8664



CDS Structure of MLOC_74540






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74540.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74540.1CUST_13200_PI427708083AvailableAvailablecontig_66060 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g30310.1 -1 1e-134 429 214/245 (87%) 13106.m03129 protein alpha-glucan water dikinase, chloroplast precursor, putative, expressed
TAIR PP10 AT1G10760.1 -1 7e-126 404 193/231 (84%) | Symbols: SEX1, SOP1, SOP, GWD1, GWD | Pyruvate phosphate dikinase, PEP/pyruvate binding domain | chr1:3581210-3590043 REVERSE LENGTH=1399