MLOC_74533 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains478.194365.029394.255414.524
LEAShoots from the seedlings (10 cm shoot stage)137.73540.823252.898668.3539
INF1Young developing inflorescences (5mm)126.461117.186104.47103.396
INF2Developing inflorescences (1-1.5 cm)64.064680.348279.56383.9959
ROORoots from the seedlings (10 cm shoot stage)262.79195.59184.983255.397
NODDeveloping tillers at six leaf stage, 3rd internode157.26122.47856.3853371.667
CAR5Developing grain, bracts removed (5 DPA)189.233188.583189.022191.089
CAR15Developing grain, bracts removed (15 DPA)34.661130.771431.413776.7472



CDS Structure of MLOC_74533






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74533.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251023.1NoneNoneNoneNone
MLOC_74533.1CUST_6385_PI427708080AvailableAvailablecontig_6605 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g50885.1 -1 0.0 728 373/377 (99%) 13103.m12851 protein actin, putative, expressed
TAIR PP10 AT3G12110.1 -1 0.0 721 367/377 (97%) | Symbols: ACT11 | actin-11 | chr3:3858116-3859609 FORWARD LENGTH=377