MLOC_7452 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.842375 | 0.936431 | 1.00801 | 0.91345 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.06407 | 2.96236 | 2.642 | 2.56821 |
| INF1 | Young developing inflorescences (5mm) | 0.0254303 | 0.029747 | 0.127348 | 0.0615509 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.98912 | 2.11927 | 2.21292 | 2.56864 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 27.6189 | 22.7208 | 31.8129 | 70.7892 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.198053 | 0.186636 | 0.220245 | 0.203535 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.51788 | 4.10542 | 4.04906 | 10.8477 |
CDS Structure of MLOC_7452
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7452.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g49160.1 |
+2 |
2e-62 |
205 |
106/170 (62%) |
13104.m05019 protein zinc finger, C3HC4 type domain containing protein, expressed |
| TAIR PP10 |
AT1G63840.1 |
+2 |
9e-13 |
67 |
30/65 (46%) |
RING/U-box superfamily protein | chr1:23689991-23690491 REVERSE LENGTH=166 |
