MLOC_74448 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.269272.8473.046123.10148
LEAShoots from the seedlings (10 cm shoot stage)16.946129.254422.554820.4102
INF1Young developing inflorescences (5mm)2.578332.281832.006492.12442
INF2Developing inflorescences (1-1.5 cm)1.573631.581341.625821.92453
ROORoots from the seedlings (10 cm shoot stage)0.6412830.8323680.6860611.03735
NODDeveloping tillers at six leaf stage, 3rd internode0.5914320.3589891.158711.71196
CAR5Developing grain, bracts removed (5 DPA)6.237155.797626.227416.54935
CAR15Developing grain, bracts removed (15 DPA)1.454881.354741.143143.50432



CDS Structure of MLOC_74448






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74448.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365936NoneNoneNoneNone
MLOC_74448.5CUST_6374_PI427708080AvailableAvailablecontig_65881 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g05260.1 +1 0.0 738 375/511 (73%) 13111.m00501 protein phosphoglycerate mutase, putative, expressed
TAIR PP10 AT5G22620.2 +1 4e-179 520 265/468 (57%) phosphoglycerate/bisphosphoglycerate mutase family protein | chr5:7517731-7520223 REVERSE LENGTH=482