MLOC_74447 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.034813.303713.019514.0745
LEAShoots from the seedlings (10 cm shoot stage)8.176935.661829.822656.64214
INF1Young developing inflorescences (5mm)22.251317.041613.909315.6842
INF2Developing inflorescences (1-1.5 cm)12.999514.085515.54716.5465
ROORoots from the seedlings (10 cm shoot stage)7.8401411.635212.591313.7618
NODDeveloping tillers at six leaf stage, 3rd internode0.7796420.6735582.936093.2386
CAR5Developing grain, bracts removed (5 DPA)17.188316.993115.869517.7731
CAR15Developing grain, bracts removed (15 DPA)4.252113.393852.469538.90847



CDS Structure of MLOC_74447






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74447.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74447.1CUST_16058_PI427708080AvailableAvailablecontig_65881 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g05230.1 +1 0.0 601 349/527 (66%) 13112.m00526 protein ATP-dependent RNA helicase, putative, expressed
TAIR PP10 AT2G28600.1 +1 1e-92 299 199/501 (40%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:12251845-12254672 FORWARD LENGTH=502