MLOC_7442 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.65711 | 2.9906 | 3.60144 | 2.61622 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.83797 | 3.03677 | 3.14769 | 2.41515 |
| INF1 | Young developing inflorescences (5mm) | 11.9767 | 11.2038 | 13.2202 | 8.61631 |
| INF2 | Developing inflorescences (1-1.5 cm) | 32.1417 | 28.4969 | 29.177 | 30.252 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.77382 | 2.92411 | 1.78056 | 3.0187 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.28749 | 5.17572 | 8.59418 | 19.6171 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 23.7301 | 20.551 | 20.1737 | 19.5095 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.54537 | 3.47024 | 4.19753 | 7.20349 |
CDS Structure of MLOC_7442
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7442.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g03570.1 |
+1 |
3e-23 |
101 |
45/59 (76%) |
13101.m00306 protein transcription factor X1, putative, expressed |
| TAIR PP10 |
AT1G80790.1 |
+1 |
4e-16 |
79 |
36/59 (61%) |
XH/XS domain-containing protein | chr1:30360280-30362856 FORWARD LENGTH=634 |
