MLOC_74419 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6832561.05840.6003250.851715
LEAShoots from the seedlings (10 cm shoot stage)2.251051.66121.375221.46963
INF1Young developing inflorescences (5mm)1.227730.7664150.452460.72159
INF2Developing inflorescences (1-1.5 cm)0.9423070.676780.6990510.868631
ROORoots from the seedlings (10 cm shoot stage)0.5396160.5222790.52630.60947
NODDeveloping tillers at six leaf stage, 3rd internode0.2808560.4471790.861231.73352
CAR5Developing grain, bracts removed (5 DPA)1.308161.439541.301851.341
CAR15Developing grain, bracts removed (15 DPA)0.2071440.2329950.1351730.501811



CDS Structure of MLOC_74419






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74419.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355886NoneNoneNoneNone
MLOC_74419.1CUST_6371_PI427708080AvailableAvailablecontig_65823 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g02280.1 -1 0.0 1036 519/609 (85%) 13107.m00151 protein pentatricopeptide, putative, expressed
TAIR PP10 AT4G37380.1 -1 0.0 617 311/605 (51%) Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:17572040-17573938 REVERSE LENGTH=632