MLOC_74416 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.05665850.07211540.03440440.0895109
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.0409201000.0377171
INF2Developing inflorescences (1-1.5 cm)00.019734600.0499254
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)1.186351.03821.010941.41498
CAR15Developing grain, bracts removed (15 DPA)116.467133.32274.1722349.465



CDS Structure of MLOC_74416






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74416.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373016NoneNoneNoneNone
MLOC_74416.1CUST_6369_PI427708080AvailableAvailablecontig_65822 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g20340.1 +3 3e-65 219 166/376 (44%) 13107.m02073 protein heavy metal-associated domain containing protein, expressed
TAIR PP10 AT5G63530.2 +3 9e-35 133 104/345 (30%) | Symbols: ATFP3, FP3 | farnesylated protein 3 | chr5:25433423-25435614 FORWARD LENGTH=340