MLOC_74367 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.679315.342613.394914.844
LEAShoots from the seedlings (10 cm shoot stage)30.526620.532826.871419.2664
INF1Young developing inflorescences (5mm)7.854885.349534.290475.03924
INF2Developing inflorescences (1-1.5 cm)1.932122.657522.184032.58327
ROORoots from the seedlings (10 cm shoot stage)2.24383.64045.312873.6643
NODDeveloping tillers at six leaf stage, 3rd internode0.8985060.953061.573652.53914
CAR5Developing grain, bracts removed (5 DPA)29.085832.233329.299730.4623
CAR15Developing grain, bracts removed (15 DPA)0.5525460.5622550.5143151.37268



CDS Structure of MLOC_74367






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74367.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360334NoneNoneNoneNone
MLOC_74367.1CUST_6366_PI427708080AvailableAvailablecontig_65697 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g09940.1 +1 2e-82 257 168/207 (81%) 13102.m01097 protein peroxiredoxin, putative, expressed
TAIR PP10 AT3G52960.1 +1 1e-71 229 120/155 (77%) Thioredoxin superfamily protein | chr3:19639699-19640403 FORWARD LENGTH=234