MLOC_74354 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.465315.872318.891718.6789
LEAShoots from the seedlings (10 cm shoot stage)36.97987.2221812.232115.2177
INF1Young developing inflorescences (5mm)3.028452.265512.153172.30487
INF2Developing inflorescences (1-1.5 cm)2.088211.209742.362822.15275
ROORoots from the seedlings (10 cm shoot stage)29.489924.531323.079428.705
NODDeveloping tillers at six leaf stage, 3rd internode53.594876.072413.2423166.324
CAR5Developing grain, bracts removed (5 DPA)49.650351.046644.479652.2958
CAR15Developing grain, bracts removed (15 DPA)2.002362.541462.707586.54915



CDS Structure of MLOC_74354






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74354.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364130NoneNoneNoneNone
MLOC_74354.1CUST_6365_PI427708080AvailableAvailablecontig_65675 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g35630.1 +2 0.0 592 324/519 (62%) 13106.m03679 protein reticuline oxidase-like protein precursor, putative, expressed
TAIR PP10 AT5G44410.1 +2 1e-122 382 226/528 (43%) FAD-binding Berberine family protein | chr5:17891246-17892853 REVERSE LENGTH=535