MLOC_74333 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.032322.823242.768683.1857
LEAShoots from the seedlings (10 cm shoot stage)1.040740.3702560.417810.555345
INF1Young developing inflorescences (5mm)8.536569.747319.006448.45338
INF2Developing inflorescences (1-1.5 cm)5.552288.283866.938978.55707
ROORoots from the seedlings (10 cm shoot stage)1.442432.081752.171152.72426
NODDeveloping tillers at six leaf stage, 3rd internode0.3175590.3672240.6242991.47301
CAR5Developing grain, bracts removed (5 DPA)1.953672.078872.253412.28929
CAR15Developing grain, bracts removed (15 DPA)0.1090860.2177520.3195110.525846



CDS Structure of MLOC_74333






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74333.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374656NoneNoneNoneNone
MLOC_74333.3CUST_6362_PI427708080AvailableAvailablecontig_65632 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g10850.1 -2 0.0 684 351/467 (75%) 13112.m01154 protein hhH-GPD superfamily base excision DNA repair protein, putative
TAIR PP10 AT4G12740.1 -2 1e-136 415 222/426 (52%) HhH-GPD base excision DNA repair family protein | chr4:7494578-7497596 REVERSE LENGTH=630