MLOC_74328 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.319904000.448956
LEAShoots from the seedlings (10 cm shoot stage)2.390531.296311.495731.43496
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.8704360.30731300.578899
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_74328






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74328.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74328.1CUST_9949_PI427708083AvailableAvailablecontig_65625 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g44370.1 -3 7e-29 110 55/85 (65%) 13112.m04694 protein expressed protein
TAIR PP10 AT1G29700.1 -3 9e-25 98 50/83 (60%) Metallo-hydrolase/oxidoreductase superfamily protein | chr1:10385196-10386906 REVERSE LENGTH=350