MLOC_74308 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.022145.968919.535797.87125
LEAShoots from the seedlings (10 cm shoot stage)15.265326.216325.047119.8468
INF1Young developing inflorescences (5mm)0.542320.6935390.8518680.667095
INF2Developing inflorescences (1-1.5 cm)0.5014740.5079790.6573580.663372
ROORoots from the seedlings (10 cm shoot stage)12.18369.0736313.135112.5007
NODDeveloping tillers at six leaf stage, 3rd internode12.7998.9184544.901551.1715
CAR5Developing grain, bracts removed (5 DPA)13.374519.457313.648617.3595
CAR15Developing grain, bracts removed (15 DPA)0.5588850.4243170.8556221.5325



CDS Structure of MLOC_74308






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74308.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74308.1CUST_16037_PI427708080AvailableAvailablecontig_65563 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g26370.1 +3 5e-38 137 102/196 (52%) 13109.m02534 protein DUF581 domain containing protein, expressed
TAIR PP10 AT1G53903.1 +3 1e-12 66 28/47 (60%) Protein of unknown function (DUF581) | chr1:20132363-20132842 FORWARD LENGTH=126