MLOC_74301 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.478256.575694.120886.05546
LEAShoots from the seedlings (10 cm shoot stage)5.059384.45725.013493.83351
INF1Young developing inflorescences (5mm)12.696213.208112.2110.3909
INF2Developing inflorescences (1-1.5 cm)9.0416410.662710.987910.6708
ROORoots from the seedlings (10 cm shoot stage)8.937510.02810.077910.7643
NODDeveloping tillers at six leaf stage, 3rd internode3.408023.673649.1135612.8923
CAR5Developing grain, bracts removed (5 DPA)7.314249.359377.66237.70739
CAR15Developing grain, bracts removed (15 DPA)1.418081.223611.326623.04285



CDS Structure of MLOC_74301






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74301.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362394NoneNoneNoneNone
MLOC_74301.1CUST_6360_PI427708080AvailableAvailablecontig_65543 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g02440.1 +1 4e-49 167 75/108 (69%) 13109.m00164 protein DCL, chloroplast precursor, putative, expressed
TAIR PP10 AT3G46630.1 +1 3e-40 144 65/108 (60%) Protein of unknown function (DUF3223) | chr3:17181138-17182346 REVERSE LENGTH=207