MLOC_74291 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains42.291635.683235.515540.9225
LEAShoots from the seedlings (10 cm shoot stage)34.070931.715128.559128.5549
INF1Young developing inflorescences (5mm)28.04128.695830.807726.4789
INF2Developing inflorescences (1-1.5 cm)38.244237.088137.805344.9935
ROORoots from the seedlings (10 cm shoot stage)41.572940.728539.654354.2529
NODDeveloping tillers at six leaf stage, 3rd internode63.511860.386361.4495207.235
CAR5Developing grain, bracts removed (5 DPA)35.708635.05234.151937.5054
CAR15Developing grain, bracts removed (15 DPA)29.425426.957628.838970.9615



CDS Structure of MLOC_74291






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74291.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250036.1NoneNoneNoneNone
MLOC_74291.2CUST_6358_PI427708080AvailableAvailablecontig_6553 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g46390.1 +2 2e-109 323 172/188 (91%) 13103.m04991 protein ras-related protein, putative, expressed
TAIR PP10 AT5G45130.1 +2 1e-94 285 145/162 (90%) | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, ATRAB-F2A, RAB-F2A | RAB homolog 1 | chr5:18244495-18246060 FORWARD LENGTH=200