MLOC_74279 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.473734.701234.8123.93245
LEAShoots from the seedlings (10 cm shoot stage)6.994014.866746.672925.00667
INF1Young developing inflorescences (5mm)10.62599.836189.961047.53621
INF2Developing inflorescences (1-1.5 cm)12.248713.977813.295712.5537
ROORoots from the seedlings (10 cm shoot stage)4.602155.181734.853495.57815
NODDeveloping tillers at six leaf stage, 3rd internode2.345634.263545.2531612.8764
CAR5Developing grain, bracts removed (5 DPA)14.189813.741514.983211.8997
CAR15Developing grain, bracts removed (15 DPA)11.316911.926810.147321.9221



CDS Structure of MLOC_74279






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74279.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74279.2CUST_16031_PI427708080AvailableAvailablecontig_6551 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g70060.2 -1 5e-77 264 151/273 (55%) 13101.m07604 protein protein of unknown function, DUF618 domain containing protein, expressed
TAIR PP10 AT3G26990.1 -1 3e-18 90 55/171 (32%) ENTH/VHS family protein | chr3:9948426-9951557 REVERSE LENGTH=513