MLOC_74262 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.37958.387229.602529.42618
LEAShoots from the seedlings (10 cm shoot stage)5.085540.4096520.8038981.56468
INF1Young developing inflorescences (5mm)20.361721.970322.986919.1815
INF2Developing inflorescences (1-1.5 cm)15.863218.463621.371920.8023
ROORoots from the seedlings (10 cm shoot stage)8.165577.173736.676436.61353
NODDeveloping tillers at six leaf stage, 3rd internode0.06571280.1310350.03857070.20522
CAR5Developing grain, bracts removed (5 DPA)39.915136.302834.434636.6633
CAR15Developing grain, bracts removed (15 DPA)4.114033.552593.649059.58878



CDS Structure of MLOC_74262






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74262.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360632NoneNoneNoneNone
MLOC_74262.1CUST_479_PI427708083AvailableAvailablecontig_65460 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g49100.1 -3 0.0 553 292/339 (86%) 13106.m05237 protein retrotransposon protein, putative, unclassified, expressed
TAIR PP10 AT1G62440.1 -3 1e-115 373 203/346 (59%) | Symbols: LRX2 | leucine-rich repeat/extensin 2 | chr1:23111818-23115293 FORWARD LENGTH=826