MLOC_74259 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.6688.3923610.75078.70893
LEAShoots from the seedlings (10 cm shoot stage)20.708817.801929.630917.537
INF1Young developing inflorescences (5mm)7.4380310.061312.79286.93108
INF2Developing inflorescences (1-1.5 cm)9.719618.4223410.04118.75551
ROORoots from the seedlings (10 cm shoot stage)27.779416.547418.642820.385
NODDeveloping tillers at six leaf stage, 3rd internode38.902849.315480.3418162.667
CAR5Developing grain, bracts removed (5 DPA)6.489888.383356.81146.0068
CAR15Developing grain, bracts removed (15 DPA)2.01332.10621.482953.90902



CDS Structure of MLOC_74259






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74259.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74259.1CUST_13191_PI427708083AvailableAvailablecontig_65451 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g64930.1 -2 2e-52 180 84/105 (80%) 13101.m07005 protein expressed protein
TAIR PP10 AT1G21790.1 -2 1e-44 158 79/105 (75%) TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein | chr1:7654357-7655691 FORWARD LENGTH=288