MLOC_74253 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains25.404134.653437.364131.7787
LEAShoots from the seedlings (10 cm shoot stage)190.96356.065284.03231.973
INF1Young developing inflorescences (5mm)27.327420.874720.610718.8537
INF2Developing inflorescences (1-1.5 cm)17.199417.638320.121818.4623
ROORoots from the seedlings (10 cm shoot stage)33.987747.405352.740654.7295
NODDeveloping tillers at six leaf stage, 3rd internode65.480852.387257.1496176.46
CAR5Developing grain, bracts removed (5 DPA)39.684641.409842.183337.2758
CAR15Developing grain, bracts removed (15 DPA)25.476427.906326.051556.4817



CDS Structure of MLOC_74253






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74253.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355609NoneNoneNoneNone
MLOC_74253.1CUST_478_PI427708083AvailableAvailablecontig_65448 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g05820.2 +2 2e-121 384 203/213 (95%) 13107.m00544 protein hydroxyacid oxidase 1, putative, expressed
TAIR PP10 AT3G14420.2 +2 3e-121 383 199/214 (93%) Aldolase-type TIM barrel family protein | chr3:4821804-4823899 FORWARD LENGTH=367