MLOC_74211 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains65.99766.09980.639354.6728
LEAShoots from the seedlings (10 cm shoot stage)47.53249.656543.306430.9516
INF1Young developing inflorescences (5mm)35.498437.375540.799225.9241
INF2Developing inflorescences (1-1.5 cm)47.292129.802838.179834.0502
ROORoots from the seedlings (10 cm shoot stage)59.095352.945981.093348.3122
NODDeveloping tillers at six leaf stage, 3rd internode71.21920.622252.237560.7962
CAR5Developing grain, bracts removed (5 DPA)34.951737.847133.848826.3094
CAR15Developing grain, bracts removed (15 DPA)44.527637.387835.144179.3784



CDS Structure of MLOC_74211






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74211.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74211.1CUST_13189_PI427708083AvailableAvailablecontig_65368 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g07240.2 +2 1e-24 104 56/88 (64%) 13107.m09980 protein ubiquitin-conjugating enzyme, putative, expressed
TAIR PP10 AT2G02760.1 +2 2e-24 102 56/88 (64%) | Symbols: ATUBC2, UBC2 | ubiquiting-conjugating enzyme 2 | chr2:774271-775149 FORWARD LENGTH=152