MLOC_742 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.698355.286916.71586.11701
LEAShoots from the seedlings (10 cm shoot stage)2.961730.2894051.095921.24986
INF1Young developing inflorescences (5mm)10.183710.20268.32247.92366
INF2Developing inflorescences (1-1.5 cm)8.785048.696568.453868.69987
ROORoots from the seedlings (10 cm shoot stage)2.897514.256675.015024.92367
NODDeveloping tillers at six leaf stage, 3rd internode1.561169.420040.5270693.45701
CAR5Developing grain, bracts removed (5 DPA)3.964643.616214.463283.48741
CAR15Developing grain, bracts removed (15 DPA)0.6265470.5225480.3659641.15771



CDS Structure of MLOC_742






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_742.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_742.2CUST_13188_PI427708083AvailableAvailablecontig_105488 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g01680.1 +3 2e-92 301 158/233 (68%) 13108.m00094 protein WD domain, G-beta repeat domain containing protein, expressed
TAIR PP10 AT5G64630.3 +3 2e-50 183 107/229 (47%) | Symbols: FAS2, NFB01, NFB1, MUB3.9 | Transducin/WD40 repeat-like superfamily protein | chr5:25833724-25836158 FORWARD LENGTH=428