MLOC_74195 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.017218.679320.837915.4126
LEAShoots from the seedlings (10 cm shoot stage)12.60758.6509513.31768.19968
INF1Young developing inflorescences (5mm)13.346118.133415.13279.74136
INF2Developing inflorescences (1-1.5 cm)12.753518.46614.598913.692
ROORoots from the seedlings (10 cm shoot stage)26.423812.055314.979315.227
NODDeveloping tillers at six leaf stage, 3rd internode18.379818.409512.322945.4342
CAR5Developing grain, bracts removed (5 DPA)11.834411.510715.64619.64246
CAR15Developing grain, bracts removed (15 DPA)4.126833.138553.269877.01928



CDS Structure of MLOC_74195






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74195.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74195.2CUST_13187_PI427708083AvailableAvailablecontig_65331 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g57420.1 -1 2e-32 119 53/75 (71%) 13104.m06007 protein reticulon domain containing protein, putative, expressed
TAIR PP10 AT2G15280.1 -1 4e-13 66 26/54 (48%) Reticulon family protein | chr2:6640191-6641414 FORWARD LENGTH=201