- Predicted Gene MLOC_74195
MLOC_74195 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 20.0172 | 18.6793 | 20.8379 | 15.4126 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.6075 | 8.65095 | 13.3176 | 8.19968 |
INF1 | Young developing inflorescences (5mm) | 13.3461 | 18.1334 | 15.1327 | 9.74136 |
INF2 | Developing inflorescences (1-1.5 cm) | 12.7535 | 18.466 | 14.5989 | 13.692 |
ROO | Roots from the seedlings (10 cm shoot stage) | 26.4238 | 12.0553 | 14.9793 | 15.227 |
NOD | Developing tillers at six leaf stage, 3rd internode | 18.3798 | 18.4095 | 12.3229 | 45.4342 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.8344 | 11.5107 | 15.6461 | 9.64246 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.12683 | 3.13855 | 3.26987 | 7.01928 |
CDS Structure of MLOC_74195
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_74195.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g57420.1 |
-1 |
2e-32 |
119 |
53/75 (71%) |
13104.m06007 protein reticulon domain containing protein, putative, expressed |
TAIR PP10 |
AT2G15280.1 |
-1 |
4e-13 |
66 |
26/54 (48%) |
Reticulon family protein | chr2:6640191-6641414 FORWARD LENGTH=201 |