MLOC_7419 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 28.1833 | 26.1108 | 26.8106 | 29.0465 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 21.5039 | 15.3598 | 19.4447 | 17.7723 |
| INF1 | Young developing inflorescences (5mm) | 20.581 | 21.8556 | 27.1694 | 20.5068 |
| INF2 | Developing inflorescences (1-1.5 cm) | 22.3421 | 23.9418 | 25.7542 | 27.5552 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 24.1654 | 25.7893 | 26.5615 | 34.8074 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 22.9674 | 22.8761 | 20.5664 | 85.3861 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 30.3225 | 33.3396 | 30.0292 | 33.1712 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.09676 | 8.2741 | 6.99163 | 18.8975 |
CDS Structure of MLOC_7419
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7419.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g15590.2 |
+2 |
9e-156 |
449 |
218/273 (80%) |
13112.m01645 protein heat shock protein DnaJ, putative, expressed |
| TAIR PP10 |
AT1G61770.1 |
+2 |
8e-133 |
389 |
186/273 (68%) |
Chaperone DnaJ-domain superfamily protein | chr1:22810220-22812370 FORWARD LENGTH=300 |
