MLOC_74175 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.492711.486111.60312.407
LEAShoots from the seedlings (10 cm shoot stage)8.253398.3428811.05867.51801
INF1Young developing inflorescences (5mm)21.909119.70722.574418.1486
INF2Developing inflorescences (1-1.5 cm)14.570517.945114.567517.4634
ROORoots from the seedlings (10 cm shoot stage)12.309612.409911.513814.1883
NODDeveloping tillers at six leaf stage, 3rd internode0.929811.536073.298345.39483
CAR5Developing grain, bracts removed (5 DPA)11.411410.604610.648510.6712
CAR15Developing grain, bracts removed (15 DPA)3.297663.873782.63858.10774



CDS Structure of MLOC_74175






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74175.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358487NoneNoneNoneNone
MLOC_74175.2CUST_6344_PI427708080AvailableAvailablecontig_65301 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g73550.1 +3 0.0 682 347/427 (81%) 13101.m08024 protein mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed
TAIR PP10 AT1G51980.1 +3 2e-143 430 230/427 (54%) Insulinase (Peptidase family M16) protein | chr1:19323692-19326771 REVERSE LENGTH=503