MLOC_74149 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3431840.3952090.6376380.440013
LEAShoots from the seedlings (10 cm shoot stage)1.965780.3844260.7150480.856701
INF1Young developing inflorescences (5mm)0.026258700.03334610.03232
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)5.389374.095252.909384.54531
NODDeveloping tillers at six leaf stage, 3rd internode24.538530.034626.939678.3631
CAR5Developing grain, bracts removed (5 DPA)0.03364940.01591510.03352390.0321
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_74149






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74149.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365713NoneNoneNoneNone
MLOC_74149.3CUST_18442_PI427708080AvailableAvailablecontig_65209 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g36690.1 +3 0.0 915 470/618 (76%) 13107.m03766 protein CSLF2 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed
TAIR PP10 AT3G03050.1 +3 0.0 593 300/617 (49%) | Symbols: CSLD3, KJK, ATCSLD3 | cellulose synthase-like D3 | chr3:687873-691629 FORWARD LENGTH=1145