MLOC_74127 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.812582.447642.359342.75601
LEAShoots from the seedlings (10 cm shoot stage)2.930072.70071.790731.60446
INF1Young developing inflorescences (5mm)1.651622.598343.105041.5874
INF2Developing inflorescences (1-1.5 cm)2.689352.969992.035682.29583
ROORoots from the seedlings (10 cm shoot stage)8.092573.656293.201623.68807
NODDeveloping tillers at six leaf stage, 3rd internode2.15282.982575.680317.61076
CAR5Developing grain, bracts removed (5 DPA)1.065681.174451.720090.942366
CAR15Developing grain, bracts removed (15 DPA)0.2330290.5026860.3518010.674149



CDS Structure of MLOC_74127






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74127.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357983NoneNoneNoneNone
MLOC_74127.3CUST_6338_PI427708080AvailableAvailablecontig_65202 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g18680.1 +3 2e-45 160 135/156 (87%) 13103.m02237 protein membrane associated DUF588 domain containing protein, putative, expressed
TAIR PP10 AT2G38480.1 +3 2e-15 75 66/156 (42%) Uncharacterised protein family (UPF0497) | chr2:16110960-16111694 REVERSE LENGTH=188