MLOC_74117 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.694621.03316.200425.5673
LEAShoots from the seedlings (10 cm shoot stage)6.927465.829024.765636.06544
INF1Young developing inflorescences (5mm)29.004630.300928.17631.3183
INF2Developing inflorescences (1-1.5 cm)24.699826.895623.724336.7078
ROORoots from the seedlings (10 cm shoot stage)14.824513.806816.449725.3432
NODDeveloping tillers at six leaf stage, 3rd internode1.910022.846799.0948117.1783
CAR5Developing grain, bracts removed (5 DPA)14.005516.768315.837121.7906
CAR15Developing grain, bracts removed (15 DPA)2.755652.856252.02347.82005



CDS Structure of MLOC_74117






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74117.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360645NoneNoneNoneNone
MLOC_74117.1CUST_6336_PI427708080AvailableAvailablecontig_65187 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g46600.1 +1 8e-63 207 140/164 (85%) 13103.m05015 protein acidic leucine-rich nuclear phosphoprotein 32-related protein 2, putative, expressed
TAIR PP10 AT3G50690.1 +1 8e-26 108 83/164 (51%) Leucine-rich repeat (LRR) family protein | chr3:18835271-18837097 REVERSE LENGTH=447