MLOC_74116 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.907595.956645.13865.84064
LEAShoots from the seedlings (10 cm shoot stage)204.799305.397249.291205.78
INF1Young developing inflorescences (5mm)0.118120.02337450.125460.0783754
INF2Developing inflorescences (1-1.5 cm)0.2703370.08051810.1243220.189607
ROORoots from the seedlings (10 cm shoot stage)9.127985.123054.378326.20355
NODDeveloping tillers at six leaf stage, 3rd internode324.844267.968462.014805.957
CAR5Developing grain, bracts removed (5 DPA)67.238989.347896.724994.0777
CAR15Developing grain, bracts removed (15 DPA)13.08117.328914.536840.635



CDS Structure of MLOC_74116






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74116.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248641.1NoneNoneNoneNone
MLOC_74116.1CUST_6335_PI427708080AvailableAvailablecontig_65180 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g32650.1 -1 0.0 721 365/398 (92%) 13111.m03183 protein chalcone synthase, putative, expressed
TAIR PP10 AT5G13930.1 -1 0.0 652 325/393 (83%) | Symbols: CHS, TT4, ATCHS | Chalcone and stilbene synthase family protein | chr5:4488762-4490035 FORWARD LENGTH=395