MLOC_74054 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains58.414354.97754.219650.2856
LEAShoots from the seedlings (10 cm shoot stage)27.0773.176534.245729.33948
INF1Young developing inflorescences (5mm)142.848148.527162.113121.725
INF2Developing inflorescences (1-1.5 cm)124.438158.187120.202149.362
ROORoots from the seedlings (10 cm shoot stage)18.180828.612751.322630.7409
NODDeveloping tillers at six leaf stage, 3rd internode0.40858300.0791240.137414
CAR5Developing grain, bracts removed (5 DPA)38.781347.086732.933239.1642
CAR15Developing grain, bracts removed (15 DPA)3.161591.626793.516275.87269



CDS Structure of MLOC_74054






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74054.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_74054.1NoneAvailableAvailablecontig_65070 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g37780.1 +1 1e-12 60 30/30 (100%) 13104.m03615 protein histone H3.3a, putative, expressed
TAIR PP10 AT5G10980.1 +1 2e-12 60 30/30 (100%) Histone superfamily protein | chr5:3472591-3473349 REVERSE LENGTH=136