- Predicted Gene MLOC_74054
MLOC_74054 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 58.4143 | 54.977 | 54.2196 | 50.2856 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 27.077 | 3.17653 | 4.24572 | 9.33948 |
INF1 | Young developing inflorescences (5mm) | 142.848 | 148.527 | 162.113 | 121.725 |
INF2 | Developing inflorescences (1-1.5 cm) | 124.438 | 158.187 | 120.202 | 149.362 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.1808 | 28.6127 | 51.3226 | 30.7409 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.408583 | 0 | 0.079124 | 0.137414 |
CAR5 | Developing grain, bracts removed (5 DPA) | 38.7813 | 47.0867 | 32.9332 | 39.1642 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.16159 | 1.62679 | 3.51627 | 5.87269 |
CDS Structure of MLOC_74054
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_74054.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g37780.1 |
+1 |
1e-12 |
60 |
30/30 (100%) |
13104.m03615 protein histone H3.3a, putative, expressed |
TAIR PP10 |
AT5G10980.1 |
+1 |
2e-12 |
60 |
30/30 (100%) |
Histone superfamily protein | chr5:3472591-3473349 REVERSE LENGTH=136 |