MLOC_74048 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains344.604263.876300.08302.547
LEAShoots from the seedlings (10 cm shoot stage)3.4089916.29820.2459035.359
INF1Young developing inflorescences (5mm)9.3317915.840223.599914.8989
INF2Developing inflorescences (1-1.5 cm)5.349533.6765911.59887.08556
ROORoots from the seedlings (10 cm shoot stage)254.221223.117150.345240.824
NODDeveloping tillers at six leaf stage, 3rd internode96.773849.971512.45295.5673
CAR5Developing grain, bracts removed (5 DPA)4.914772.570712.380623.27649
CAR15Developing grain, bracts removed (15 DPA)1.354620.858421.619833.13958



CDS Structure of MLOC_74048






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_74048.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249727.1NoneNoneNoneNone
MLOC_74048.1CUST_6330_PI427708080AvailableAvailablecontig_65035 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g39990.1 +1 0.0 638 313/401 (78%) 13111.m03952 protein patatin, putative, expressed
TAIR PP10 AT4G37050.1 +1 3e-146 434 216/400 (54%) | Symbols: PLP4, PLA V, AtPLAIVC | PATATIN-like protein 4 | chr4:17457261-17459642 REVERSE LENGTH=428